Transcript: lnc-ERFE-1:1

Basic information

LNCipedia transcript ID: lnc-ERFE-1:1 
LNCipedia gene ID: lnc-ERFE-1
Location (hg38): chr2:238231809-238234207
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2399 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225057.2|HBMT00000795760.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.4962 non-coding 
CPAT coding probability 75.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ERFE-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM132B-1:3
5.0 lnc-FAM132B-1:3
5.1 lnc-TRAF3IP1-17:1
5.2 lnc-ERFE-1:1