Transcript: lnc-ETNK1-3:15

Basic information

LNCipedia transcript ID: lnc-ETNK1-3:15 
LNCipedia gene ID: lnc-ETNK1-3
Location (hg38): chr12:22699861-22888043
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 563 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000256995.2|ENST00000413794.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.0829 non-coding 
CPAT coding probability 8.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETNK1-3:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ETNK1-3:15
5.0 lnc-ETNK1-3:15
5.1 lnc-KIAA1551-103:2
5.2 lnc-ETNK1-3:15