Transcript: lnc-ETNK1-3:16

Basic information

LNCipedia transcript ID: lnc-ETNK1-3:16 
LNCipedia gene ID: lnc-ETNK1-3
Location (hg38): chr12:22699861-23127018
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2024 bp
Exons: 11
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000256995.2|FTMT24700038973.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.3704 non-coding 
CPAT coding probability 4.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETNK1-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ETNK1-3:16
5.0 lnc-ETNK1-3:16
5.1 lnc-KIAA1551-103:3
5.2 lnc-ETNK1-3:16