Transcript: lnc-F13A1-3:16

Basic information

LNCipedia transcript ID: lnc-F13A1-3:16 
LNCipedia gene ID: lnc-F13A1-3
Location (hg38): chr6:6704256-6801171
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1898 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226281.2|MICT00000296649.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.75 non-coding 
CPAT coding probability 14.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F13A1-3:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-F13A1-3:16
5.0 lnc-F13A1-3:16
5.1 lnc-ECI2-161:2
5.2 lnc-F13A1-3:16