Transcript: lnc-FBXO31-12:9

Basic information

LNCipedia transcript ID: lnc-FBXO31-12:9 
LNCipedia gene ID: lnc-FBXO31-12
Location (hg38): chr16:87241575-87262879
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 459 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024777; NONHSAT144258
Alternative gene names: XLOC_012052; linc-MTHFSD-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.2831 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXO31-12:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C16orf95-2:1
3.1 lnc-C16orf95-1:7
4.0 lnc-C16orf95-1:7
4.1 lnc-C16orf95-1:7
5.0 lnc-C16orf95-1:7
5.1 lnc-FBXO31-7:9
5.2 lnc-FBXO31-12:9