Transcript: lnc-FOXD4L5-13:1

Basic information

LNCipedia transcript ID: lnc-FOXD4L5-13:1 
LNCipedia gene ID: lnc-FOXD4L5-13
Ensembl Gene ID: ENSG00000225411
Ensembl Transcript ID: ENST00000417843
Location (hg38): chr9:63802144-63814159
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2878 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT131613; ENST00000417843.2
Alternative gene names: ENSG00000225411.2; RP11-764K9.1; CR786580.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.7501 non-coding 
CPAT coding probability 6.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXD4L5-13:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM27B-2:2
4.0 lnc-FAM27B-2:2
4.1 lnc-FAM27B-2:2
5.0 lnc-FAM27B-2:2
5.1 lnc-ZFAND5-70:1
5.2 lnc-FOXD4L5-13:1