Transcript: lnc-FPGT-5:1

Basic information

LNCipedia transcript ID: lnc-FPGT-5:1 
LNCipedia gene ID: lnc-FPGT-5
Location (hg38): chr1:72775181-72783980
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 760 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000983; NONHSAT003918
Alternative gene names: XLOC_000254; linc-FPGT-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.0701 non-coding 
CPAT coding probability 2.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FPGT-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FPGT-4:1
3.1 lnc-FPGT-5:1
4.0 lnc-FPGT-5:1
4.1 lnc-FPGT-5:1
5.0 lnc-FPGT-5:1
5.1 lnc-TYW3-12:3
5.2 lnc-FPGT-5:1