Transcript: lnc-GJA10-23:4

Basic information

LNCipedia transcript ID: lnc-GJA10-23:4 
LNCipedia gene ID: lnc-GJA10-23
Location (hg38): chr6:90297118-90302454
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 872 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000084842.1|FTMT22300007348.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -137.3558 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GJA10-23:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GJA10-23:4
5.0 lnc-GJA10-23:4
5.1 lnc-PM20D2-23:4
5.2 lnc-GJA10-23:4