Transcript: lnc-GLB1L2-4:1

Basic information

LNCipedia transcript ID: lnc-GLB1L2-4:1 
LNCipedia gene ID: lnc-GLB1L2-4
Ensembl Gene ID: ENSG00000251226
Ensembl Transcript ID: ENST00000513405
Location (hg38): chr11:134735596-134763810
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3684 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000513405; ENST00000513405.1; RP11-469N6.1-001; OTTHUMT00000382010.2; NONHSAT025284
Alternative gene names: ENSG00000251226; RP11-469N6.1; ENSG00000251226.1; OTTHUMG00000165126.2; AP001999.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 63.8621 coding 
CPAT coding probability 69.61% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GLB1L2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLB1L2-4:1
3.1 lnc-GLB1L2-4:1
4.0 lnc-GLB1L2-4:1
4.1 lnc-GLB1L2-4:1
5.0 lnc-GLB1L2-4:1
5.1 lnc-GLB1L3-9:1
5.2 lnc-GLB1L2-4:1