Transcript: lnc-GPR119-1:1

Basic information

LNCipedia transcript ID: lnc-GPR119-1:1 ?
LNCipedia gene ID: lnc-GPR119-1
Location (hg38): chrX:130477069-130524257
Strand: -
Class: intergenic
Transcript size: 1646 bp
Exons: 12
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000458525; ENST00000458525.1; RP1-274L7.1-001; OTTHUMT00000058271.1; NONHSAT138520
Alternative gene names: ENSG00000229702; RP1-274L7.1; ENSG00000229702.1; OTTHUMG00000022398.1


RNA sequence:

Structure:

Protein coding potential


Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites 0 non-coding ?
Highest peak:0
PhyloCSF score 4.0823 non-coding ?
CPAT coding probability 14.07% non-coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: yes

Locus conservation

Locus conservation?
lnc-GPR119-1:1 no no

Available literature

No linked literature available at this time.


Other resources

LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
1.3 lnc-GPR119-1:1
4.1 lnc-GPR119-1:1
4.0 lnc-GPR119-1:1
3.1 lnc-GPR119-1:1