Transcript: lnc-GSG1L-1:13

Basic information

LNCipedia transcript ID: lnc-GSG1L-1:13 
LNCipedia gene ID: lnc-GSG1L-1
Location (hg38): chr16:27708426-27718774
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 677 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261329.1|ENST00000563052.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -156.1723 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-GSG1L-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-GSG1L-1:13
5.0 lnc-GSG1L-1:13
5.1 lnc-SULT1A2-36:10
5.2 lnc-GSG1L-1:13