Transcript: lnc-HCRTR1-1:28

Basic information

LNCipedia transcript ID: lnc-HCRTR1-1:28 
LNCipedia gene ID: lnc-HCRTR1-1
Location (hg38): chr1:31645057-31652290
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3572 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264078.1|MICT00000007088.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.3836 non-coding 
CPAT coding probability 2.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HCRTR1-1:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HCRTR1-1:28
5.0 lnc-HCRTR1-1:28
5.1 lnc-TINAGL1-1:18
5.2 lnc-HCRTR1-1:28