Transcript: TNFRSF14-AS1:21

Basic information

LNCipedia transcript ID: TNFRSF14-AS1:21 
LNCipedia gene ID: TNFRSF14-AS1
Location (hg38): chr1:2550078-2554946
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2442 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT000451
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.2685 non-coding 
CPAT coding probability 35.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TNFRSF14-AS1:21 no no no no

Available literature

  1. Zhai (2017), Expression pattern of genome-scale long noncoding RNA following acute myocardial infarction in Chinese Uyghur patients., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HES5-1:12
4.0 lnc-HES5-1:12
4.1 lnc-HES5-1:12
5.0 lnc-HES5-1:12
5.1 TNFRSF14-AS1:6
5.2 TNFRSF14-AS1:21