Transcript: lnc-HIST1H2BJ-8:3

Basic information

LNCipedia transcript ID: lnc-HIST1H2BJ-8:3 
LNCipedia gene ID: lnc-HIST1H2BJ-8
Location (hg38): chr6:27019105-27020350
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1246 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1186:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -18.3263 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HIST1H2BJ-8:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HIST1H2BJ-8:3
4.1 lnc-HIST1H2BJ-8:3
5.0 lnc-HIST1H2BJ-8:3
5.1 lnc-C6orf62-58:2
5.2 lnc-HIST1H2BJ-8:3