Transcript: lnc-IFI44-12:1

Basic information

LNCipedia transcript ID: lnc-IFI44-12:1 
LNCipedia gene ID: lnc-IFI44-12
Ensembl Gene ID: ENSG00000285462
Ensembl Transcript ID: ENST00000645557
Location (hg38): chr1:79325008-79346445
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1507 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000645557.1
Alternative gene names: ENSG00000285462.1; AL353651.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -116.056 non-coding 
CPAT coding probability 2.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFI44-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GIPC2-12:1
5.1 lnc-GIPC2-12:1
5.2 lnc-IFI44-12:1