Transcript: lnc-IGFBP2-4:3

Basic information

LNCipedia transcript ID: lnc-IGFBP2-4:3 
LNCipedia gene ID: lnc-IGFBP2-4
Location (hg38): chr2:216799579-216803532
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 328 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004023; NONHSAT076832
Alternative gene names: XLOC_001861; linc-RUFY4-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -524.9191 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP2-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC007557.1.1-2:1
3.1 lnc-AC007557.1.1-2:1
4.0 lnc-AC007557.1.1-2:1
4.1 lnc-AC007557.1.1-2:1
5.0 lnc-AC007557.1.1-2:1
5.1 lnc-TMEM169-27:3
5.2 lnc-IGFBP2-4:3