Transcript: lnc-IL17RA-33:7

Basic information

LNCipedia transcript ID: lnc-IL17RA-33:7 
LNCipedia gene ID: lnc-IL17RA-33
Location (hg38): chr22:17044869-17047471
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 280 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT083176
Alternative gene names: SAHL1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.784 non-coding 
CPAT coding probability 2.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17RA-33:7 no no no no

Available literature

  1. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17RA-2:7
4.0 CECR7:7
4.1 CECR7:7
5.0 CECR7:7
5.1 lnc-SERPIND1-83:7
5.2 lnc-IL17RA-33:7