Transcript: lnc-KIFAP3-2:10

Basic information

LNCipedia transcript ID: lnc-KIFAP3-2:10 
LNCipedia gene ID: lnc-KIFAP3-2
Location (hg38): chr1:170460347-170538348
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2333 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231407.1|ENCT00000034172.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.5867 non-coding 
CPAT coding probability 4.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIFAP3-2:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIFAP3-2:10
5.0 lnc-KIFAP3-2:10
5.1 lnc-SH2D1B-91:2
5.2 lnc-KIFAP3-2:10