Transcript: lnc-KIFAP3-2:2

Basic information

LNCipedia transcript ID: lnc-KIFAP3-2:2 
LNCipedia gene ID: lnc-KIFAP3-2
Ensembl Gene ID: ENSG00000231407
Ensembl Transcript ID: ENST00000421020
Location (hg38): chr1:170509961-170532000
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 755 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421020.1; RP11-576I22.2-001; OTTHUMT00000085222.1; NONHSAT007502
Alternative gene names: ENSG00000231407.1; RP11-576I22.2; OTTHUMG00000035227.1; ENSG00000231407.5; AL354732.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -223.0696 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIFAP3-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIFAP3-2:2
4.0 lnc-KIFAP3-2:2
4.1 lnc-KIFAP3-2:2
5.0 lnc-KIFAP3-2:2
5.1 lnc-SH2D1B-91:12
5.2 lnc-KIFAP3-2:2