Transcript: lnc-KLF17-1:11

Basic information

LNCipedia transcript ID: lnc-KLF17-1:11 
LNCipedia gene ID: lnc-KLF17-1
Location (hg38): chr1:44043956-44067530
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 961 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT002855
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.3469 non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF17-1:11 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLF17-1:11
4.0 lnc-KLF17-1:11
4.1 lnc-KLF17-1:11
5.0 lnc-KLF17-1:11
5.1 lnc-CDC20-18:11
5.2 lnc-KLF17-1:11