Transcript: lnc-KMT5A-1:23

Basic information

LNCipedia transcript ID: lnc-KMT5A-1:23 
LNCipedia gene ID: lnc-KMT5A-1
Location (hg38): chr12:123363921-123366053
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 737 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000256092.2|ENCT00000097034.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -405.7779 non-coding 
CPAT coding probability 5.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KMT5A-1:23 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SETD8-1:12
5.0 lnc-SETD8-1:12
5.1 lnc-KMT5A-1:9
5.2 lnc-KMT5A-1:23