Transcript: lnc-LONP2-6:4

Basic information

LNCipedia transcript ID: lnc-LONP2-6:4 
LNCipedia gene ID: lnc-LONP2-6
Location (hg38): chr16:48744248-48745734
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1487 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT142358; FPKM1_group_11611_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.988 non-coding 
CPAT coding probability 4.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LONP2-6:4 no no no no

Available literature

  1. Wang (2016), Transcriptome Analysis of Long Noncoding RNAs in Toll-Like Receptor 3-Activated Mesenchymal Stem Cells., Stem Cells Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LONP2-6:4
4.0 lnc-LONP2-6:4
4.1 lnc-LONP2-6:4
5.0 lnc-LONP2-6:4
5.1 lnc-ADGRG1-167:10
5.2 lnc-LONP2-6:4