Transcript: lnc-METTL4-2:2

Basic information

LNCipedia transcript ID: lnc-METTL4-2:2 
LNCipedia gene ID: lnc-METTL4-2
Ensembl Gene ID: ENSG00000263745
Ensembl Transcript ID: ENST00000579097
Location (hg38): chr18:2034679-2239880
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 779 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579097.1; RP11-161I6.2-003; OTTHUMT00000441770.1; NONHSAT056917
Alternative gene names: ENSG00000263745.1; RP11-161I6.2; OTTHUMG00000178384.2; ENSG00000263745.5; ENSG00000263745.6; AP005230.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3711 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL4-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL4-2:2
4.0 lnc-METTL4-2:2
4.1 lnc-METTL4-2:2
5.0 lnc-METTL4-2:2
5.1 lnc-SMAD2-371:8
5.2 lnc-METTL4-2:2