Transcript: lnc-MLXIP-1:1

Basic information

LNCipedia transcript ID: lnc-MLXIP-1:1 
LNCipedia gene ID: lnc-MLXIP-1
Location (hg38): chr12:122072118-122076780
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2869 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000504714; TCONS_00020239; NONHSAT031489
Alternative gene names: ENSG00000251645; XLOC_009920; linc-MLXIP-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.0751 non-coding 
CPAT coding probability 5.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MLXIP-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MLXIP-1:1
3.1 lnc-MLXIP-1:1
4.0 lnc-MLXIP-1:1
4.1 lnc-MLXIP-1:1
5.0 lnc-MLXIP-1:1
5.1 lnc-PSMD9-11:1
5.2 lnc-MLXIP-1:1