Transcript: lnc-MYOC-2:1

Basic information

LNCipedia transcript ID: lnc-MYOC-2:1 
LNCipedia gene ID: lnc-MYOC-2
Location (hg38): chr1:171168104-171251794
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 500 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000455124.1; RP1-45C12.1-001; OTTHUMT00000086231.1; NONHSAT007515
Alternative gene names: ENSG00000231424.1; RP1-45C12.1; OTTHUMG00000035508.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.2092 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYOC-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYOC-2:1
4.0 lnc-MYOC-2:1
4.1 lnc-MYOC-2:1
5.0 lnc-MYOC-2:1
5.1 lnc-SH2D1B-94:1
5.2 lnc-MYOC-2:1