Transcript: lnc-NBPF16-7:1

Basic information

LNCipedia transcript ID: lnc-NBPF16-7:1 ?
LNCipedia gene ID: lnc-NBPF16-7
Location (hg19): chr1:148734646-148737423
Strand: +
Class: undefined
Transcript size: bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1490:1
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites non-coding ?
Highest peak:
PhyloCSF score non-coding ?
CPAT coding probability 0.00% non-coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: no

Locus conservation

Locus conservation?
lnc-NBPF16-7:1 no no

Secondary structure information

RNAfold image: download
Randfold minimum free energy:
Randfold P-value:

Targetting miRNAs

No microRNA targets found with MirTarget2

Available literature

No linked literature available at this time.

LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
4.0 lnc-NBPF16-7:1