Transcript: lnc-NNT-2:6

Basic information

LNCipedia transcript ID: lnc-NNT-2:6 
LNCipedia gene ID: lnc-NNT-2
Location (hg38): chr5:43515307-43519431
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4125 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248240.1|ENCT00000343982.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.5865 non-coding 
CPAT coding probability 24.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NNT-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NNT-2:6
5.0 lnc-NNT-2:6
5.1 lnc-CARD6-52:5
5.2 lnc-NNT-2:6