Transcript: lnc-NR2F2-6:2

Basic information

LNCipedia transcript ID: lnc-NR2F2-6:2 
LNCipedia gene ID: lnc-NR2F2-6
Ensembl Gene ID: ENSG00000259359
Ensembl Transcript ID: ENST00000558449
Location (hg38): chr15:96171595-96174339
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 639 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000558449.1; RP11-327J17.2-001; OTTHUMT00000415466.1; NONHSAT050225
Alternative gene names: ENSG00000259359.1; RP11-327J17.2; OTTHUMG00000171853.1; AC012409.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -281.2343 non-coding 
CPAT coding probability 2.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR2F2-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NR2F2-6:2
4.0 lnc-NR2F2-6:2
4.1 lnc-NR2F2-6:2
5.0 lnc-NR2F2-6:2
5.1 lnc-ARRDC4-46:4
5.2 lnc-NR2F2-6:2