Transcript: lnc-NR2F2-6:3

Basic information

LNCipedia transcript ID: lnc-NR2F2-6:3 
LNCipedia gene ID: lnc-NR2F2-6
Location (hg38): chr15:96171605-96174073
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00023539
Alternative gene names: XLOC_011370; linc-NR2F2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -533.1436 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR2F2-6:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NR2F2-2:1
3.1 lnc-NR2F2-6:3
4.0 lnc-NR2F2-6:3
4.1 lnc-NR2F2-6:3
5.0 lnc-NR2F2-6:3
5.1 lnc-ARRDC4-46:5
5.2 lnc-NR2F2-6:3