Transcript: lnc-NUTM2E-2:4

Basic information

LNCipedia transcript ID: lnc-NUTM2E-2:4 
LNCipedia gene ID: lnc-NUTM2E-2
Location (hg38): chr10:79920178-79923119
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1424 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00017676; NR_002724
Alternative gene names: XLOC_008531; linc-C10orf57-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 914.5667 coding 
CPAT coding probability 90.24% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NUTM2E-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM22E-2:1
3.1 lnc-FAM22E-2:1
4.0 lnc-FAM22E-2:1
4.1 lnc-FAM22E-2:1
5.0 lnc-FAM22E-2:1
5.1 lnc-MTRNR2L5-249:4
5.2 lnc-NUTM2E-2:4