Transcript: lnc-OR14K1-1:8

Basic information

LNCipedia transcript ID: lnc-OR14K1-1:8 
LNCipedia gene ID: lnc-OR14K1-1
Ensembl Gene ID: ENSG00000235749
Ensembl Transcript ID: ENST00000582218
Location (hg38): chr1:247640049-247663843
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 722 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582218.1; RP11-634B7.4-002; OTTHUMT00000444817.1; NONHSAT010791
Alternative gene names: ENSG00000235749.2; RP11-634B7.4; OTTHUMG00000040651.2; AL390860.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.2521 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR14K1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR2G3-1:3
4.0 lnc-OR14K1-1:3
4.1 lnc-OR2W3-1:8
5.0 lnc-OR2W3-1:8
5.1 lnc-OR2G3-39:5
5.2 lnc-OR14K1-1:8