Transcript: lnc-OR6C70-1:4

Basic information

LNCipedia transcript ID: lnc-OR6C70-1:4 
LNCipedia gene ID: lnc-OR6C70-1
Location (hg38): chr12:55434737-55479472
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 532 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000555146.1; RP11-110A12.2-002; OTTHUMT00000410909.1; NONHSAT028660
Alternative gene names: ENSG00000258763.1; RP11-110A12.2; OTTHUMG00000170899.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.0483 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OR6C70-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OR6C70-1:4
4.0 lnc-OR6C70-1:4
4.1 lnc-OR6C70-1:4
5.0 lnc-OR6C70-1:4
5.1 lnc-OR6C70-1:4
5.2 lnc-OR6C70-1:4