Transcript: lnc-OTUD7B-2:2

Basic information

LNCipedia transcript ID: lnc-OTUD7B-2:2 
LNCipedia gene ID: lnc-OTUD7B-2
Ensembl Gene ID: ENSG00000285184
Ensembl Transcript ID: ENST00000643984
Location (hg38): chr1:150047834-150067665
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 583 bp
Exons: 5
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000643984.1
Alternative gene names: ENSG00000285184.1; AC244033.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.0871 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OTUD7B-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MTMR11-2:1
5.1 lnc-MTMR11-2:1
5.2 lnc-OTUD7B-2:2