Transcript: lnc-PANK1-2:12

Basic information

LNCipedia transcript ID: lnc-PANK1-2:12 
LNCipedia gene ID: lnc-PANK1-2
Location (hg38): chr10:89696736-89701451
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3430 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000240996.1|ENCT00000058361.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.7916 non-coding 
CPAT coding probability 24.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PANK1-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PANK1-2:12
5.0 lnc-PANK1-2:12
5.1 lnc-HTR7-17:5
5.2 lnc-PANK1-2:12