Transcript: lnc-PCM1-4:13

Basic information

LNCipedia transcript ID: lnc-PCM1-4:13 
LNCipedia gene ID: lnc-PCM1-4
Location (hg38): chr8:17801344-17813117
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 11774 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253944.1|HBMT00001386092.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.5153 non-coding 
CPAT coding probability 2.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PCM1-4:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PCM1-4:13
5.0 lnc-PCM1-4:13
5.1 lnc-PCM1-4:13
5.2 lnc-PCM1-4:13