Transcript: lnc-PDGFA-6:6

Basic information

LNCipedia transcript ID: lnc-PDGFA-6:6 
LNCipedia gene ID: lnc-PDGFA-6
Location (hg38): chr7:29246-31980
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2735 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT118564
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 69.6586 coding 
CPAT coding probability 42.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PDGFA-6:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC145676.2.1-6:4
4.0 lnc-AC145676.2.1-6:4
4.1 lnc-AC145676.2.1-6:4
5.0 lnc-AC145676.2.1-6:4
5.1 lnc-PRKAR1B-26:6
5.2 lnc-PDGFA-6:6