Transcript: lnc-PELI2-5:1

Basic information

LNCipedia transcript ID: lnc-PELI2-5:1 
LNCipedia gene ID: lnc-PELI2-5
Ensembl Gene ID: ENSG00000259868
Ensembl Transcript ID: ENST00000569625
Location (hg38): chr14:55915727-55916326
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 600 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569625.1; RP11-1012E15.1-001; OTTHUMT00000421422.1
Alternative gene names: ENSG00000259868.1; RP11-1012E15.1; OTTHUMG00000172943.1; ENSG00000259868.2; RP11-1012E15.2; AL163952.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.5351 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PELI2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PELI2-5:1
4.0 lnc-PELI2-5:1
4.1 lnc-PELI2-5:1
5.0 lnc-PELI2-5:1
5.1 lnc-AP5M1-17:1
5.2 lnc-PELI2-5:1