Transcript: lnc-PNRC2-1:3

Basic information

LNCipedia transcript ID: lnc-PNRC2-1:3 
LNCipedia gene ID: lnc-PNRC2-1
Location (hg38): chr1:24021720-24023508
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 369 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_289_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -307.43 non-coding 
CPAT coding probability 1.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PNRC2-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PNRC2-1:3
4.0 lnc-PNRC2-1:3
4.1 lnc-PNRC2-1:3
5.0 lnc-PNRC2-1:3
5.1 lnc-ELOA-15:2
5.2 lnc-PNRC2-1:3