Transcript: lnc-POTEC-224:1

Basic information

LNCipedia transcript ID: lnc-POTEC-224:1 
LNCipedia gene ID: lnc-POTEC-224
Ensembl Gene ID: ENSG00000278923
Ensembl Transcript ID: ENST00000623604
Location (hg38): chr18:15056845-15066598
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 607 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623604.2
Alternative gene names: ENSG00000278923.2; AP005242.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.8541 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POTEC-224:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SMAD2-224:1
5.1 lnc-SMAD2-224:1
5.2 lnc-POTEC-224:1