Transcript: lnc-POU3F3-5:5

Basic information

LNCipedia transcript ID: lnc-POU3F3-5:5 
LNCipedia gene ID: lnc-POU3F3-5
Location (hg38): chr2:104406504-104419240
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4407 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227157.1|MICT00000195851.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.3778 non-coding 
CPAT coding probability 2.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POU3F3-5:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-POU3F3-5:5
5.0 lnc-POU3F3-5:5
5.1 lnc-SLC9A4-47:3
5.2 lnc-POU3F3-5:5