Transcript: lnc-POU3F3-7:10

Basic information

LNCipedia transcript ID: lnc-POU3F3-7:10 
LNCipedia gene ID: lnc-POU3F3-7
Location (hg38): chr2:104854115-104855073
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 878 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269707.1|FTMT20700009798.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -46.3517 non-coding 
CPAT coding probability 18.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-POU3F3-7:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-POU3F3-7:10
5.0 lnc-POU3F3-7:10
5.1 lnc-SLC9A4-61:10
5.2 lnc-POU3F3-7:10