Transcript: lnc-PPIAL4A-2:13

Basic information

LNCipedia transcript ID: lnc-PPIAL4A-2:13 
LNCipedia gene ID: lnc-PPIAL4A-2
Location (hg38): chr1:120942412-120973358
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 609 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000444499.2
Alternative gene names: ENSG00000236943.2; RP11-640M9.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 47.8279 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-PPIAL4A-2:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPIAL4B-2:23
4.0 lnc-PPIAL4B-2:23
4.1 lnc-PPIAL4B-2:23
5.0 lnc-PPIAL4B-2:23
5.1 lnc-PPIAL4A-2:5
5.2 lnc-PPIAL4A-2:13