Transcript: lnc-PPP4R1-2:11

Basic information

LNCipedia transcript ID: lnc-PPP4R1-2:11 
LNCipedia gene ID: lnc-PPP4R1-2
Location (hg38): chr18:9315264-9334445
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 4257 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000264964.1|MICT00000158439.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.1815 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-PPP4R1-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PPP4R1-2:11
5.0 lnc-PPP4R1-2:11
5.1 lnc-SMAD2-311:5
5.2 lnc-PPP4R1-2:11