Transcript: lnc-REEP3-2:3

Basic information

LNCipedia transcript ID: lnc-REEP3-2:3 
LNCipedia gene ID: lnc-REEP3-2
Location (hg38): chr10:64691456-64692975
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 539 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT013626; FPKM1_group_3403_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.2202 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-REEP3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-REEP3-2:3
4.0 lnc-REEP3-2:3
4.1 lnc-REEP3-2:3
5.0 lnc-REEP3-2:3
5.1 lnc-MTRNR2L5-54:10
5.2 lnc-REEP3-2:3