Transcript: lnc-RGMA-18:2

Basic information

LNCipedia transcript ID: lnc-RGMA-18:2 
LNCipedia gene ID: lnc-RGMA-18
Location (hg38): chr15:95091978-95132846
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 458 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023798; NONHSAT050179
Alternative gene names: XLOC_011591; linc-RGMA-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -391.6077 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RGMA-18:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC016251.1-5:2
3.1 lnc-AC016251.1-9:2
4.0 lnc-AC016251.1-9:2
4.1 lnc-AC016251.1-9:2
5.0 lnc-AC016251.1-9:2
5.1 lnc-CIB1-53:2
5.2 lnc-RGMA-18:2