Transcript: lnc-RNF152-2:4

Basic information

LNCipedia transcript ID: lnc-RNF152-2:4 
LNCipedia gene ID: lnc-RNF152-2
Location (hg38): chr18:61579431-61607001
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 307 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026538; NONHSAT059601
Alternative gene names: XLOC_012861; linc-MC4R-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.0949 non-coding 
CPAT coding probability 3.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF152-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNF152-3:1
3.1 lnc-RNF152-3:1
4.0 lnc-RNF152-2:4
4.1 lnc-RNF152-2:4
5.0 lnc-RNF152-2:4
5.1 lnc-MBD2-63:4
5.2 lnc-RNF152-2:4