Transcript: lnc-RNF152-2:5

Basic information

LNCipedia transcript ID: lnc-RNF152-2:5 
LNCipedia gene ID: lnc-RNF152-2
Location (hg38): chr18:61592390-61606954
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 338 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026539; NONHSAT059605
Alternative gene names: XLOC_012861; linc-MC4R-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.1208 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF152-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RNF152-3:2
3.1 lnc-RNF152-3:2
4.0 lnc-RNF152-2:5
4.1 lnc-RNF152-2:5
5.0 lnc-RNF152-2:5
5.1 lnc-MBD2-63:5
5.2 lnc-RNF152-2:5