Transcript: lnc-RNF152-2:8

Basic information

LNCipedia transcript ID: lnc-RNF152-2:8 
LNCipedia gene ID: lnc-RNF152-2
Ensembl Gene ID: ENSG00000267279
Ensembl Transcript ID: ENST00000587754
Location (hg38): chr18:61585746-61606657
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 735 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059602; ENST00000587754.1
Alternative gene names: ENSG00000267279.1; RP11-879F14.2; AC090409.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.7622 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RNF152-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF152-3:7
4.0 lnc-RNF152-2:8
4.1 lnc-RNF152-2:8
5.0 lnc-RNF152-2:8
5.1 lnc-MBD2-63:8
5.2 lnc-RNF152-2:8