Transcript: lnc-RPL10A-1:3

Basic information

LNCipedia transcript ID: lnc-RPL10A-1:3 
LNCipedia gene ID: lnc-RPL10A-1
Location (hg38): chr6:35542394-35554542
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 11779 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228559.1|MICT00000302403.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 32.9878 non-coding 
CPAT coding probability 15.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-RPL10A-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RPL10A-1:3
5.0 lnc-RPL10A-1:3
5.1 lnc-PI16-43:2
5.2 lnc-RPL10A-1:3