Transcript: lnc-SCD-2:3

Basic information

LNCipedia transcript ID: lnc-SCD-2:3 
LNCipedia gene ID: lnc-SCD-2
Location (hg38): chr10:100229660-100231987
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2328 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227492.1|ENCT00000049338.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.0872 non-coding 
CPAT coding probability 5.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SCD-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-SCD-2:3
5.0 lnc-SCD-2:3
5.1 lnc-SMC3-155:2
5.2 lnc-SCD-2:3